PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe3G212300.1.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 93aa    MW: 10547.4 Da    PI: 9.18
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe3G212300.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH192.5e-069501055
                       HHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH 10 rrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                       + RR++i +++  L++l+P      +k   Ka +L + ++Y++sLq
  Aqcoe3G212300.1.p  9 KVRREKISERMKFLQDLVPGY----NKVTGKALMLDEIINYVQSLQ 50
                       78******************8....666*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.731149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-4555IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.66E-14969IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.06E-6954No hitNo description
Gene3DG3DSA:4.10.280.107.9E-131267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 93 aa     Download sequence    Send to blast
MGMDLSTPKV RREKISERMK FLQDLVPGYN KVTGKALMLD EIINYVQSLQ RQVEFLSMKL  60
ATVNPRLDFN MVATLTKDLF QSCESLSQAM TN*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002264969.21e-40PREDICTED: transcription factor bHLH77-like
SwissprotQ9SRT23e-38BH062_ARATH; Transcription factor bHLH62
TrEMBLF6GWE78e-41F6GWE7_VITVI; Putative uncharacterized protein
STRINGVIT_05s0029g00390.t012e-40(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G07340.12e-39bHLH family protein